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Release:

October 2012.

Citation:

WormQTL – Public archive and analysis web portal for natural variation data in Caenorhabditis spp.

L. Basten Snoek*1, K. Joeri Van der Velde*2, Danny Arends*2, Yang Li*2, Antje Beyer3, Mark Elvin4, Jasmin Fisher3, Alex Hajnal5, Michael O. Hengartner5, Gino Poulin4, Miriam Rodriguez1, Tobias Schmid5, Sabine Schrimpf5, Feng Xue4, Ritsert C. Jansen2, Jan E. Kammenga1, Morris A. Swertz2,6

1Wageningen University, Laboratory of Nematology, Wageningen, The Netherlands; 2Groningen Bioinformatics Centre, University of Groningen, Groningen, The Netherlands; 3Microsoft Research Cambridge, Cambridge, United Kingdom; 4University of Manchester, Manchester, United Kingdom; 5University of Zurich, Institute of Molecular Life Sciences, Zurich, Switzerland; 6Genomics Coordination Center, University Medical Center Groningen, Groningen, The Netherlands

*Contributed equally.
Correspondence: Jan.Kammenga@wur.nl; M.A.Swertz@rug.nl

References:

xQTL workbench: a scalable web environment for multi-level QTL analysis - Danny Arends; K. Joeri van der Velde; Pjotr Prins; Karl W. Broman; Steffen Moller; Ritsert C. Jansen; Morris A. Swertz

XGAP: a uniform and extensible data model and software platform for genotype and phenotype experiments - Swertz MA, Velde KJ, Tesson BM, Scheltema RA, Arends D, Vera G, Alberts R, Dijkstra M, Schofield P, Schughart K, Hancock JM, Smedley D, Wolstencroft K, Goble C, de Brock EO, Jones AR, Parkinson HE; Coordination of Mouse Informatics Resources (CASIMIR); Genotype-To-Phenotype (GEN2PHEN) Consortiums, Jansen RC.

R/qtl: QTL mapping in experimental crosses - Broman KW, Wu H, Sen S, Churchill GA.

R/qtl: high throughput Multiple QTL mapping - Danny Arends, Pjotr Prins, Ritsert C. Jansen and Karl W. Broman

Molecular Genetics Information System (MOLGENIS): alternatives in developing local experimental genomics databases - Swertz MA, De Brock EO, Van Hijum SA, De Jong A, Buist G, Baerends RJ, Kok J, Kuipers OP, Jansen RC.

The MOLGENIS toolkit: rapid prototyping of biosoftware at the push of a button - Morris A Swertz, Martijn Dijkstra, Tomasz Adamusiak, Joeri K van der Velde, Alexandros Kanterakis, Erik T Roos, Joris Lops, Gudmundur A Thorisson, Danny Arends, George Byelas, Juha Muilu, Anthony J Brookes, Engbert O de Brock, Ritsert C Jansen and Helen Parkinson

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