corrSecondOrder | Example correlation data |
corrZeroOrder | Example correlation data |
createCytoFiles | Write Cytoscape visualization files |
findMultiplePeaks | Cluster multiple mass peaks based on correlation and mass |
genotypes | Example genotype data |
loadData | Load data from csv files |
markers | Example marker data |
MetaNetwork | genetic study of metabolites and network reconstruction |
MetaNetwork-package | MetaNetwork package |
multiplePeaks | Example Multiple Peaks report |
peaks | Example peak data |
peaks2 | Example peak data |
qtlCorrSecondOrder | Calculate the second-order correlation |
qtlCorrThreshold | Estimate correlation threshold |
qtlCorrZeroOrder | Calculate the zero-order correlation |
qtlFDR | Estimate QTL thresholds for false discovery rate (FDR) |
qtlMapTwoPart | QTL test statistic using two-part model |
qtlPlot | Plot QTL profiles |
qtlProfiles | Example qtl profiles |
qtlSumm | Example QTL summary report |
qtlSummary | Summarize QTL effects |
qtlSupportInterval | Estimate QTL support interval |
qtlThreshold | Estimate QTL significance threshold. |
traits | Example traits data |
traits2 | Example traits data |