corrZeroOrder and corrSecondOrder {MetaNetwork} | R Documentation |
Example of a QTL correlation matrix of traits
that can be
produced using functions qtlCorrZeroOrder
or qtlCorrSecondOrder
.
> data(corrZeroOrder) > corrZeroOrder[1:3,1:3]
3-Hydroxypropyl | 4-Hydroxybutyl | 4-Methylsulfinylbutyl | |
3-Hydroxypropyl | 1.0000000 | 0.8205883 | 0.8471439 |
4-Hydroxybutyl | 0.8205883 | 1.0000000 | 0.9182831 |
4-Methylsulfinylbutyl | 0.8471439 | 0.9182831 | 1.0000000 |
data(corrZeroOrder) data(corrSecondOrder)
24x24 matrix of correlation coefficients between traits
.
Jingyuan Fu <j.fu@rug.nl>, Morris Swertz <m.a.swertz@rug.nl>, Ritsert Jansen <r.c.jansen@rug.nl>
Keurentjes JJB, FU J, de vos CHR, Lommen A, Hall RD, Bino RJ, van der Plas LHW, Jansen RC, Vreugdenhil D and Koornneef M. The genetics of plant metabolism. Nature Genetics (2006) 7: 842-849.
Fu J, Swertz MA, Keurentjes JJB, Jansen RC. MetaNetwork: a computational tool for the genetic study of metabolism. Nature Protocols (2007).
http://gbic.biol.rug.nl/supplementary/2007/MetaNetwork
Use qtlCorrZeroOrder
, qtlCorrSecondOrder
or cor
to reproduce this data set.
Use MetaNetwork
to produce this dataset as part a genetic
analysis protocol on metabolites.