markers {MetaNetwork} | R Documentation |
Example matrix of markers
(rownames) for Arabidopsis thaliana and their chromosome numbers (column 1)
and centi-Morgan (cM, column 2) positions, ordered by position:
> data(markers) > markers[1:5,]
chr | cM | |
PVV4 | 1 | 0.0 |
AXR-1 | 1 | 6.4 |
HH.335C-Col | 1 | 10.8 |
DF.162L/164C-Col | 1 | 12.9 |
EC.480C | 1 | 15.059 |
data(markers)
117 rows of markers and two columns for chromosome number and centi-Morgan position
Jingyuan Fu <j.fu@rug.nl>, Joost Keurentjes <Joost.Keurentjes@wur.nl>, Morris Swertz <m.a.swertz@rug.nl>, Ritsert Jansen <r.c.jansen@rug.nl>
Keurentjes JJB, FU J, de vos CHR, Lommen A, Hall RD, Bino RJ, van der Plas LHW, Jansen RC, Vreugdenhil D, and Koornneef M. The genetics of plant metabolism. Nature Genetics (2006) 7: 842-849.
Fu J, Swertz MA, Keurentjes JJB, Jansen RC. MetaNetwork: a computational tool for the genetic study of metabolism. Nature Protocols (2007).
http://gbic.biol.rug.nl/supplementary/2007/MetaNetwork
Use MetaNetwork
for automated analysis of this data set as part
a genetic analysis protocol on metabolites.